Transcript: lnc-UBE2E3-2:15

Basic information

LNCipedia transcript ID: lnc-UBE2E3-2:15 
LNCipedia gene ID: lnc-UBE2E3-2
Location (hg38): chr2:181075442-181076468
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 360 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004960; NONHSAT075859
Alternative gene names: XLOC_001775; linc-ITGA4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.7704 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBE2E3-2:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ITGA4-2:1
3.1 lnc-ITGA4-2:1
4.0 lnc-UBE2E3-2:15
4.1 lnc-UBE2E3-2:15
5.0 lnc-UBE2E3-2:15
5.1 lnc-ITGAV-37:4
5.2 lnc-UBE2E3-2:15