Transcript: lnc-UBE2I-5:1

Basic information

LNCipedia transcript ID: lnc-UBE2I-5:1 
LNCipedia gene ID: lnc-UBE2I-5
Location (hg38): chr16:1287963-1289022
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1060 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1608:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.36 non-coding 
CPAT coding probability 29.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBE2I-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-UBE2I-5:1
4.1 lnc-UBE2I-5:1
5.0 lnc-UBE2I-5:1
5.1 lnc-DNASE1L2-71:1
5.2 lnc-UBE2I-5:1