Transcript: lnc-UBE2N-1:4

Basic information

LNCipedia transcript ID: lnc-UBE2N-1:4 
LNCipedia gene ID: lnc-UBE2N-1
RefSeq ID: NR_040096
Location (hg38): chr12:93003758-93377736
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 578 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT029909; NR_040096; NR_040096.1
Alternative gene names: LOC643339


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.8666 non-coding 
CPAT coding probability 68.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UBE2N-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EEA1-1:7
4.0 lnc-UBE2N-1:4
4.1 lnc-UBE2N-1:4
5.0 lnc-UBE2N-1:4
5.1 lnc-EEA1-1:10
5.2 lnc-UBE2N-1:4