Transcript: lnc-UBE2QL1-1:1

Basic information

LNCipedia transcript ID: lnc-UBE2QL1-1:1 
LNCipedia gene ID: lnc-UBE2QL1-1
Ensembl Gene ID: ENSG00000259861
Ensembl Transcript ID: ENST00000568962
Location (hg38): chr5:6030035-6030841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 442 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000568962.1; CTC-471C19.2-001; OTTHUMT00000423122.1; NONHSAT100188
Alternative gene names: ENSG00000259861.1; CTC-471C19.2; OTTHUMG00000173440.1; AC010266.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.0488 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBE2QL1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBE2QL1-1:1
4.0 lnc-UBE2QL1-1:1
4.1 lnc-UBE2QL1-1:1
5.0 lnc-UBE2QL1-1:1
5.1 lnc-CARD6-331:1
5.2 lnc-UBE2QL1-1:1