Transcript: lnc-UBLCP1-2:17

Basic information

LNCipedia transcript ID: lnc-UBLCP1-2:17 
LNCipedia gene ID: lnc-UBLCP1-2
Ensembl Gene ID: ENSG00000249738
Ensembl Transcript ID: ENST00000636819
Location (hg38): chr5:159553002-159805536
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4154 bp
Exons: 7
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636819.1
Alternative gene names: ENSG00000249738.8; AC008697.1; ENSG00000249738.9; AC008691.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.0639 non-coding 
CPAT coding probability 2.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UBLCP1-2:17
5.0 lnc-UBLCP1-2:17
5.1 lnc-MRPL22-39:20
5.2 lnc-UBLCP1-2:17