Transcript: lnc-UBTD2-7:2

Basic information

LNCipedia transcript ID: lnc-UBTD2-7:2 
LNCipedia gene ID: lnc-UBTD2-7
Location (hg38): chr5:172106816-172114800
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 535 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT105110
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.0966 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBTD2-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXW11-7:2
4.0 lnc-UBTD2-7:2
4.1 lnc-UBTD2-7:2
5.0 lnc-UBTD2-7:2
5.1 lnc-PDLIM7-88:2
5.2 lnc-UBTD2-7:2