Transcript: lnc-UBTD2-7:3

Basic information

LNCipedia transcript ID: lnc-UBTD2-7:3 
LNCipedia gene ID: lnc-UBTD2-7
Location (hg38): chr5:172106816-172108061
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 540 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105109
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -230.8747 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBTD2-7:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXW11-7:3
4.0 lnc-UBTD2-7:3
4.1 lnc-UBTD2-7:3
5.0 lnc-UBTD2-7:3
5.1 lnc-PDLIM7-88:3
5.2 lnc-UBTD2-7:3