Transcript: lnc-UCK1-3:3

Basic information

LNCipedia transcript ID: lnc-UCK1-3:3 
LNCipedia gene ID: lnc-UCK1-3
Ensembl Gene ID: ENSG00000176868
Ensembl Transcript ID: ENST00000321081
Location (hg38): chr9:131498805-131500171
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1360 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000321081.2
Alternative gene names: ENSG00000176868.2; RP11-334J6.7; AL358781.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.5091 non-coding 
CPAT coding probability 86.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UCK1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-UCK1-3:3
4.1 lnc-UCK1-3:3
5.0 lnc-UCK1-3:3
5.1 lnc-ABO-26:2
5.2 lnc-UCK1-3:3