Transcript: lnc-UCK2-1:3

Basic information

LNCipedia transcript ID: lnc-UCK2-1:3 
LNCipedia gene ID: lnc-UCK2-1
Location (hg38): chr1:165773432-165785588
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1847 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT007336; FPKM1_group_1605_transcript_7
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.0519 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UCK2-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UCK2-1:3
4.0 lnc-UCK2-1:3
4.1 lnc-UCK2-1:3
5.0 lnc-UCK2-1:3
5.1 lnc-MAEL-26:8
5.2 lnc-UCK2-1:3