Transcript: lnc-UCK2-1:6

Basic information

LNCipedia transcript ID: lnc-UCK2-1:6 
LNCipedia gene ID: lnc-UCK2-1
Location (hg38): chr1:165769019-165778098
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4982 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224358.1|HBMT00000034393.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.2267 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UCK2-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UCK2-1:6
5.0 lnc-UCK2-1:6
5.1 lnc-MAEL-26:6
5.2 lnc-UCK2-1:6