Transcript: lnc-UCK2-1:9

Basic information

LNCipedia transcript ID: lnc-UCK2-1:9 
LNCipedia gene ID: lnc-UCK2-1
RefSeq ID: NR_125374
Location (hg38): chr1:165768929-165775449
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2148 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125374.1
Alternative gene names: LOC100147773


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.9903 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UCK2-1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MAEL-26:4
5.1 lnc-MAEL-26:4
5.2 lnc-UCK2-1:9