Transcript: lnc-UGGT1-1:1

Basic information

LNCipedia transcript ID: lnc-UGGT1-1:1 
LNCipedia gene ID: lnc-UGGT1-1
Location (hg38): chr2:128864605-128868727
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1086 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000506309; TCONS_00002721; NONHSAT074231
Alternative gene names: ENSG00000250519; XLOC_001666; linc-RAB6C-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.9568 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UGGT1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UGGT1-1:1
3.1 lnc-UGGT1-1:1
4.0 lnc-UGGT1-1:1
4.1 lnc-UGGT1-1:1
5.0 lnc-UGGT1-1:1
5.1 lnc-GPR17-14:2
5.2 lnc-UGGT1-1:1