Transcript: lnc-UGGT1-1:2

Basic information

LNCipedia transcript ID: lnc-UGGT1-1:2 
LNCipedia gene ID: lnc-UGGT1-1
RefSeq ID: NR_110278
Location (hg38): chr2:128864600-128868727
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1091 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110278; NR_110278.1
Alternative gene names: LOC101927881


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.9568 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UGGT1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UGGT1-1:2
4.0 lnc-UGGT1-1:2
4.1 lnc-UGGT1-1:2
5.0 lnc-UGGT1-1:2
5.1 lnc-GPR17-14:1
5.2 lnc-UGGT1-1:2