Transcript: lnc-UHRF2-9:1

Basic information

LNCipedia transcript ID: lnc-UHRF2-9:1 
LNCipedia gene ID: lnc-UHRF2-9
Ensembl Gene ID: ENSG00000224972
Ensembl Transcript ID: ENST00000445708
Location (hg38): chr9:6902670-6978859
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 553 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445708.1; RP11-403H13.1-001; OTTHUMT00000318596.1; NONHSAT130167
Alternative gene names: ENSG00000224972.1; RP11-403H13.1; OTTHUMG00000150500.1; AL513412.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.3621 non-coding 
CPAT coding probability 9.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UHRF2-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UHRF2-2:1
4.0 lnc-UHRF2-9:1
4.1 lnc-UHRF2-9:1
5.0 lnc-UHRF2-9:1
5.1 lnc-RECK-227:1
5.2 lnc-UHRF2-9:1