Transcript: lnc-UMPS-3:3

Basic information

LNCipedia transcript ID: lnc-UMPS-3:3 
LNCipedia gene ID: lnc-UMPS-3
Location (hg38): chr3:124748575-124749273
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 699 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608154.1
Alternative gene names: ENSG00000272947.1; RP11-71H17.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.3675 non-coding 
CPAT coding probability 3.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UMPS-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UMPS-3:3
4.0 lnc-UMPS-3:3
4.1 lnc-UMPS-3:3
5.0 lnc-UMPS-3:3
5.1 lnc-SEC22A-12:1
5.2 lnc-UMPS-3:3