Transcript: lnc-UNCX-3:1

Basic information

LNCipedia transcript ID: lnc-UNCX-3:1 
LNCipedia gene ID: lnc-UNCX-3
Location (hg38): chr7:1160026-1160759
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000436304.1; AC091729.9-003; OTTHUMT00000322840.1; NONHSAT118704
Alternative gene names: ENSG00000229043.1; AC091729.9; OTTHUMG00000151480.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.8242 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UNCX-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPER-3:1
4.0 lnc-UNCX-3:1
4.1 lnc-UNCX-3:1
5.0 lnc-UNCX-3:1
5.1 lnc-GPER1-8:1
5.2 lnc-UNCX-3:1