Transcript: lnc-UNCX-3:15

Basic information

LNCipedia transcript ID: lnc-UNCX-3:15 
LNCipedia gene ID: lnc-UNCX-3
RefSeq ID: NR_110070
Location (hg38): chr7:1160785-1165958
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2199 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110070; NR_110070.1
Alternative gene names: LOC101927021


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.3766 non-coding 
CPAT coding probability 7.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UNCX-3:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPER-3:14
4.0 lnc-UNCX-3:15
4.1 lnc-UNCX-3:15
5.0 lnc-UNCX-3:15
5.1 lnc-GPER1-8:27
5.2 lnc-UNCX-3:15