Transcript: lnc-UNCX-3:27

Basic information

LNCipedia transcript ID: lnc-UNCX-3:27 
LNCipedia gene ID: lnc-UNCX-3
Location (hg38): chr7:1160462-1172551
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 10640 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229043.2|ENCT00000395671.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 29.3766 non-coding 
CPAT coding probability 3.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UNCX-3:27 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UNCX-3:27
5.0 lnc-UNCX-3:27
5.1 lnc-GPER1-8:21
5.2 lnc-UNCX-3:27