Transcript: lnc-UPK3B-5:4

Basic information

LNCipedia transcript ID: lnc-UPK3B-5:4 
LNCipedia gene ID: lnc-UPK3B-5
Location (hg38): chr7:76549411-76621388
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 748 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT121617
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 68.0805 coding 
CPAT coding probability 5.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UPK3B-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004980.12.1-5:5
4.0 lnc-AC004980.12.1-5:5
4.1 lnc-AC004980.12.1-5:5
5.0 lnc-AC004980.12.1-5:5
5.1 lnc-FKBP6-83:5
5.2 lnc-UPK3B-5:4