Transcript: lnc-UQCRFS1-10:4

Basic information

LNCipedia transcript ID: lnc-UQCRFS1-10:4 
LNCipedia gene ID: lnc-UQCRFS1-10
Ensembl Gene ID: ENSG00000267696
Ensembl Transcript ID: ENST00000598435
Location (hg38): chr19:27638483-27640638
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 400 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT063961; ENST00000598435.1
Alternative gene names: ENSG00000267696.2; CTB-151G24.1; ENSG00000267696.6; ERVK-28


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 47.81% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UQCRFS1-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UQCRFS1-10:4
4.0 lnc-UQCRFS1-10:4
4.1 lnc-UQCRFS1-10:4
5.0 lnc-UQCRFS1-10:4
5.1 lnc-SCGB2B2-128:3
5.2 lnc-UQCRFS1-10:4