Transcript: lnc-UQCRFS1-17:1

Basic information

LNCipedia transcript ID: lnc-UQCRFS1-17:1 
LNCipedia gene ID: lnc-UQCRFS1-17
Ensembl Gene ID: ENSG00000266928
Ensembl Transcript ID: ENST00000587777
Location (hg38): chr19:28294093-28313500
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 575 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT064032; ENST00000587777.1
Alternative gene names: ENSG00000266928.1; CTB-70G10.1; AC020905.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.7202 non-coding 
CPAT coding probability 5.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UQCRFS1-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UQCRFS1-17:1
4.0 lnc-UQCRFS1-17:1
4.1 lnc-UQCRFS1-17:1
5.0 lnc-UQCRFS1-17:1
5.1 lnc-SCGB2B2-123:1
5.2 lnc-UQCRFS1-17:1