Transcript: lnc-UQCRFS1-1:2

Basic information

LNCipedia transcript ID: lnc-UQCRFS1-1:2 
LNCipedia gene ID: lnc-UQCRFS1-1
Ensembl Gene ID: ENSG00000264515
Ensembl Transcript ID: ENST00000582581
RefSeq ID: NR_040029
Location (hg38): chr19:29287011-29525752
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2582 bp
Exons: 10
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000582581.1; CTC-525D6.1-001; OTTHUMT00000444111.1; NONHSAT064098; NR_040029; ENST00000582581.5; NR_040029.1
Alternative gene names: ENSG00000264515.1; CTC-525D6.1; OTTHUMG00000178958.1; ENSG00000264515.5; AC011474.1; LOC284395


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.3508 non-coding 
CPAT coding probability 27.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UQCRFS1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UQCRFS1-1:2
4.0 lnc-UQCRFS1-1:2
4.1 lnc-UQCRFS1-1:2
5.0 lnc-UQCRFS1-1:2
5.1 lnc-SCGB2B2-116:2
5.2 lnc-UQCRFS1-1:2