Transcript: lnc-UQCRFS1-5:2

Basic information

LNCipedia transcript ID: lnc-UQCRFS1-5:2 
LNCipedia gene ID: lnc-UQCRFS1-5
Location (hg38): chr19:27986791-28000336
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 487 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027282; NONHSAT064027
Alternative gene names: XLOC_013285; linc-ZNF681-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.4136 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UQCRFS1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UQCRFS1-4:2
3.1 lnc-UQCRFS1-5:2
4.0 lnc-UQCRFS1-5:2
4.1 lnc-UQCRFS1-5:2
5.0 lnc-UQCRFS1-5:2
5.1 lnc-SCGB2B2-124:2
5.2 lnc-UQCRFS1-5:2