Transcript: lnc-UQCRFS1-6:2

Basic information

LNCipedia transcript ID: lnc-UQCRFS1-6:2 
LNCipedia gene ID: lnc-UQCRFS1-6
Ensembl Gene ID: ENSG00000266977
Ensembl Transcript ID: ENST00000589471
Location (hg38): chr19:27849730-27889222
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 458 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000589471.1
Alternative gene names: ENSG00000266977.1; CTC-459F4.5; AC006504.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.8861 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UQCRFS1-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UQCRFS1-6:2
4.0 lnc-UQCRFS1-6:2
4.1 lnc-UQCRFS1-6:2
5.0 lnc-UQCRFS1-6:2
5.1 lnc-SCGB2B2-126:1
5.2 lnc-UQCRFS1-6:2