Transcript: lnc-UQCRHL-1:3

Basic information

LNCipedia transcript ID: lnc-UQCRHL-1:3 
LNCipedia gene ID: lnc-UQCRHL-1
Ensembl Gene ID: ENSG00000179743
Ensembl Transcript ID: ENST00000317122
Location (hg38): chr1:15834474-15848147
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2473 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000317122.2
Alternative gene names: ENSG00000179743.4; FLJ37453; AL450998.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.398 non-coding 
CPAT coding probability 54.11% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UQCRHL-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZBTB17-1:5
4.1 lnc-ZBTB17-1:5
5.0 lnc-ZBTB17-1:5
5.1 lnc-LRRC38-26:3
5.2 lnc-UQCRHL-1:3