Transcript: lnc-URB1-4:2

Basic information

LNCipedia transcript ID: lnc-URB1-4:2 
LNCipedia gene ID: lnc-URB1-4
Location (hg38): chr21:32411429-32412250
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 822 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000056727.1|FTMT28200001976.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -136.0773 non-coding 
CPAT coding probability 5.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-URB1-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-URB1-4:2
5.0 lnc-URB1-4:2
5.1 lnc-TMEM50B-20:2
5.2 lnc-URB1-4:2