Transcript: lnc-URB2-1:6

Basic information

LNCipedia transcript ID: lnc-URB2-1:6 
LNCipedia gene ID: lnc-URB2-1
Location (hg38): chr1:229508440-229514311
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 340 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223635.1|HBMT00000046956.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.4372 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-URB2-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-URB2-1:6
5.0 lnc-URB2-1:6
5.1 lnc-ZNF678-65:5
5.2 lnc-URB2-1:6