Transcript: lnc-UROD-1:2

Basic information

LNCipedia transcript ID: lnc-UROD-1:2 
LNCipedia gene ID: lnc-UROD-1
Location (hg38): chr1:44986791-44992481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5691 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000117907.1|ENCT00000005341.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.2604 non-coding 
CPAT coding probability 18.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UROD-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UROD-1:2
5.0 lnc-UROD-1:2
5.1 lnc-AKR1A1-15:1
5.2 lnc-UROD-1:2