Transcript: lnc-USP12-9:12

Basic information

LNCipedia transcript ID: lnc-USP12-9:12 
LNCipedia gene ID: lnc-USP12-9
Location (hg38): chr13:27207295-27208189
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 289 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022237; NONHSAT032639
Alternative gene names: XLOC_010542; linc-USP12-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.7658 non-coding 
CPAT coding probability 8.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP12-9:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP12-3:2
3.1 lnc-USP12-3:1
4.0 lnc-USP12-3:1
4.1 LINC00412:12
5.0 LINC00412:12
5.1 lnc-SLC7A1-26:12
5.2 lnc-USP12-9:12