Transcript: lnc-USP14-3:7

Basic information

LNCipedia transcript ID: lnc-USP14-3:7 
LNCipedia gene ID: lnc-USP14-3
Location (hg38): chr18:270815-271054
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 240 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT056835; FPKM1_group_13500_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -250.6148 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP14-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP14-6:1
4.0 lnc-USP14-6:1
4.1 lnc-USP14-3:7
5.0 lnc-USP14-3:7
5.1 lnc-RIOK3-317:7
5.2 lnc-USP14-3:7