Transcript: lnc-USP14-4:1

Basic information

LNCipedia transcript ID: lnc-USP14-4:1 
LNCipedia gene ID: lnc-USP14-4
Location (hg38): chr18:314887-318033
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2411 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026226; NONHSAT056836
Alternative gene names: XLOC_012601; linc-CETN1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.929 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP14-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP14-3:1
3.1 lnc-USP14-4:1
4.0 lnc-USP14-4:1
4.1 lnc-USP14-4:1
5.0 lnc-USP14-4:1
5.1 lnc-RIOK3-316:1
5.2 lnc-USP14-4:1