Transcript: lnc-USP16-14:3

Basic information

LNCipedia transcript ID: lnc-USP16-14:3 
LNCipedia gene ID: lnc-USP16-14
Location (hg38): chr21:28885413-28896433
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 519 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000055820.1|MICT00000224788.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -101.1565 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP16-14:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-USP16-14:3
5.0 lnc-USP16-14:3
5.1 lnc-OLIG1-45:2
5.2 lnc-USP16-14:3