Transcript: lnc-USP25-8:1

Basic information

LNCipedia transcript ID: lnc-USP25-8:1 
LNCipedia gene ID: lnc-USP25-8
Location (hg38): chr21:16360787-16370812
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 446 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002ykg_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.5493 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP25-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP25-8:1
4.0 lnc-USP25-8:1
4.1 lnc-USP25-8:1
5.0 lnc-USP25-8:1
5.1 lnc-OLIG1-123:1
5.2 lnc-USP25-8:1