Transcript: lnc-USP25-9:1

Basic information

LNCipedia transcript ID: lnc-USP25-9:1 
LNCipedia gene ID: lnc-USP25-9
Location (hg38): chr21:16490978-16491248
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 271 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr21_230_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -220.0476 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP25-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP25-9:1
4.0 lnc-USP25-9:1
4.1 lnc-USP25-9:1
5.0 lnc-USP25-9:1
5.1 lnc-OLIG1-122:1
5.2 lnc-USP25-9:1