Transcript: lnc-USP31-3:1

Basic information

LNCipedia transcript ID: lnc-USP31-3:1 
LNCipedia gene ID: lnc-USP31-3
Location (hg38): chr16:22812334-22813299
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 381 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024610; NONHSAT141091
Alternative gene names: XLOC_011899; linc-CDR2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -186.1118 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP31-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP31-2:1
3.1 lnc-USP31-3:1
4.0 lnc-USP31-3:1
4.1 lnc-USP31-3:1
5.0 lnc-USP31-3:1
5.1 lnc-SULT1A2-205:2
5.2 lnc-USP31-3:1