Transcript: lnc-USP32-2:4

Basic information

LNCipedia transcript ID: lnc-USP32-2:4 
LNCipedia gene ID: lnc-USP32-2
Ensembl Gene ID: ENSG00000267248
Ensembl Transcript ID: ENST00000586143
Location (hg38): chr17:60134622-60135644
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1023 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT055079; ENST00000586143.1
Alternative gene names: ENSG00000267248.1; CTD-2319I12.4; AC025048.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP32-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP32-2:4
4.0 lnc-USP32-2:4
4.1 lnc-USP32-2:4
5.0 lnc-USP32-2:4
5.1 lnc-TUBD1-6:7
5.2 lnc-USP32-2:4