Transcript: lnc-USP35-8:1

Basic information

LNCipedia transcript ID: lnc-USP35-8:1 
LNCipedia gene ID: lnc-USP35-8
Location (hg38): chr11:79595906-79600374
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 398 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019404; NONHSAT023313
Alternative gene names: XLOC_009227; linc-C11orf82-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.8064 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP35-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP35-4:1
3.1 lnc-USP35-8:1
4.0 lnc-USP35-8:1
4.1 lnc-USP35-8:1
5.0 lnc-USP35-8:1
5.1 lnc-DDIAS-32:1
5.2 lnc-USP35-8:1