Transcript: lnc-USP36-4:4

Basic information

LNCipedia transcript ID: lnc-USP36-4:4 
LNCipedia gene ID: lnc-USP36-4
Location (hg38): chr17:78674049-78678471
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4423 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT056241
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 335.3831 coding 
CPAT coding probability 17.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP36-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAH17-2:4
4.0 lnc-USP36-4:4
4.1 lnc-USP36-4:4
5.0 lnc-USP36-4:4
5.1 lnc-SOCS3-16:4
5.2 lnc-USP36-4:4