Transcript: lnc-USP44-3:1

Basic information

LNCipedia transcript ID: lnc-USP44-3:1 
LNCipedia gene ID: lnc-USP44-3
Location (hg38): chr12:95473221-95474318
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1098 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012952.1|FTMT24600004964.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -156.1649 non-coding 
CPAT coding probability 12.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP44-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-USP44-3:1
5.0 lnc-USP44-3:1
5.1 lnc-NTN4-8:1
5.2 lnc-USP44-3:1