Transcript: lnc-USP45-2:2

Basic information

LNCipedia transcript ID: lnc-USP45-2:2 
LNCipedia gene ID: lnc-USP45-2
Location (hg38): chr6:99410941-99425275
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 652 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT114116
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -42.4977 non-coding 
CPAT coding probability 22.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP45-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COQ3-2:1
4.0 lnc-USP45-2:2
4.1 lnc-USP45-2:2
5.0 lnc-USP45-2:2
5.1 lnc-SNX3-65:1
5.2 lnc-USP45-2:2