Transcript: lnc-USP6-2:10

Basic information

LNCipedia transcript ID: lnc-USP6-2:10 
LNCipedia gene ID: lnc-USP6-2
Location (hg38): chr17:5192098-5213219
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 417 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT145188
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.4802 non-coding 
CPAT coding probability 2.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP6-2:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP6-2:10
4.0 lnc-USP6-2:10
4.1 lnc-USP6-2:10
5.0 lnc-USP6-2:10
5.1 lnc-ELP5-74:1
5.2 lnc-USP6-2:10