Transcript: lnc-USP6NL-10:1

Basic information

LNCipedia transcript ID: lnc-USP6NL-10:1 
LNCipedia gene ID: lnc-USP6NL-10
Location (hg38): chr10:9790675-9878076
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 443 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018880; NONHSAT011347
Alternative gene names: XLOC_008727; linc-KIN-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.4865 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP6NL-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf31-6:1
3.1 lnc-C10orf31-10:2
4.0 lnc-C10orf31-10:2
4.1 lnc-C10orf31-10:2
5.0 lnc-C10orf31-10:2
5.1 lnc-KLF6-126:1
5.2 lnc-USP6NL-10:1