Transcript: lnc-USP6NL-7:8

Basic information

LNCipedia transcript ID: lnc-USP6NL-7:8 
LNCipedia gene ID: lnc-USP6NL-7
Location (hg38): chr10:10784438-10794968
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 770 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT011372
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -325.4913 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP6NL-7:8 no no no no

Available literature

  1. Zhao (2014), Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implications., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf31-7:11
4.0 lnc-C10orf31-7:11
4.1 lnc-C10orf31-7:11
5.0 lnc-C10orf31-7:11
5.1 lnc-KLF6-131:8
5.2 lnc-USP6NL-7:8