Transcript: lnc-UTP23-15:2

Basic information

LNCipedia transcript ID: lnc-UTP23-15:2 
LNCipedia gene ID: lnc-UTP23-15
Ensembl Gene ID: ENSG00000253207
Ensembl Transcript ID: ENST00000518558
Location (hg38): chr8:113615504-113616958
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 560 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000518558.2
Alternative gene names: ENSG00000253207.3; RP11-67H2.1; AC103993.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.311 non-coding 
CPAT coding probability 5.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UTP23-15:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-67H2.1.1-8:2
4.1 lnc-RP11-67H2.1.1-8:2
5.0 lnc-RP11-67H2.1.1-8:2
5.1 lnc-COLEC10-25:2
5.2 lnc-UTP23-15:2