Transcript: lnc-UTP6-2:1

Basic information

LNCipedia transcript ID: lnc-UTP6-2:1 
LNCipedia gene ID: lnc-UTP6-2
Location (hg38): chr17:32081740-32081997
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 234 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000583679.1; RP11-640N20.7-001; OTTHUMT00000447089.1; NONHSAT052914
Alternative gene names: ENSG00000265652.1; RP11-640N20.7; OTTHUMG00000179559.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.0354 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UTP6-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC090616.2.1-1:1
4.0 lnc-AC090616.2.1-1:1
4.1 lnc-AC090616.2.1-1:1
5.0 lnc-AC090616.2.1-1:1
5.1 lnc-SLC6A4-89:1
5.2 lnc-UTP6-2:1