Transcript: lnc-UVSSA-1:3

Basic information

LNCipedia transcript ID: lnc-UVSSA-1:3 
LNCipedia gene ID: lnc-UVSSA-1
Location (hg38): chr4:1546829-1550682
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3663 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008737; NONHSAT094717
Alternative gene names: XLOC_003422; linc-TACC3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.8204 non-coding 
CPAT coding probability 66.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UVSSA-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CRIPAK-1:3
3.1 lnc-CRIPAK-1:3
4.0 lnc-CRIPAK-1:3
4.1 lnc-CRIPAK-1:3
5.0 lnc-CRIPAK-1:3
5.1 lnc-GPR78-106:3
5.2 lnc-UVSSA-1:3