Transcript: lnc-VDAC2-1:12

Basic information

LNCipedia transcript ID: lnc-VDAC2-1:12 
LNCipedia gene ID: lnc-VDAC2-1
RefSeq ID: NR_132791
Location (hg38): chr10:75712455-75743848
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 922 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_132791.1
Alternative gene names: LOC105378367


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -386.2896 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VDAC2-1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MTRNR2L5-203:1
5.1 lnc-MTRNR2L5-203:1
5.2 lnc-VDAC2-1:12