Transcript: lnc-VDAC2-5:1

Basic information

LNCipedia transcript ID: lnc-VDAC2-5:1 
LNCipedia gene ID: lnc-VDAC2-5
Location (hg38): chr10:75642476-75643099
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 624 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT014116; ENST00000595383.1
Alternative gene names: ENSG00000268659.1; RP11-310J24.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.9793 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VDAC2-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF503-AS2-5:1
4.0 lnc-ZNF503-AS2-5:1
4.1 lnc-ZNF503-AS2-5:1
5.0 lnc-ZNF503-AS2-5:1
5.1 lnc-MTRNR2L5-202:1
5.2 lnc-VDAC2-5:1