Transcript: lnc-VDAC2-5:2

Basic information

LNCipedia transcript ID: lnc-VDAC2-5:2 
LNCipedia gene ID: lnc-VDAC2-5
Ensembl Gene ID: ENSG00000268659
Ensembl Transcript ID: ENST00000595383
Location (hg38): chr10:75642476-75643106
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 631 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000595383.2
Alternative gene names: ENSG00000268659.2; RP11-310J24.3; AL589863.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -25.9793 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VDAC2-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZNF503-AS2-5:2
4.1 lnc-ZNF503-AS2-5:2
5.0 lnc-ZNF503-AS2-5:2
5.1 lnc-MTRNR2L5-202:2
5.2 lnc-VDAC2-5:2