Transcript: lnc-VEGFD-1:4

Basic information

LNCipedia transcript ID: lnc-VEGFD-1:4 
LNCipedia gene ID: lnc-VEGFD-1
Location (hg38): chrX:15345972-15347475
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 600 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT136341
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 665.7439 coding 
CPAT coding probability 28.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VEGFD-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIGA-1:4
4.0 lnc-FIGF-1:4
4.1 lnc-FIGF-1:4
5.0 lnc-FIGF-1:4
5.1 lnc-PCSK1N-187:4
5.2 lnc-VEGFD-1:4